Working with GitHub Copilot
note
Seqera Cloud users receive $20 in free credits to get started with Seqera AI. Contact us for additional credits.
The seqera skill command installs a skill file that enables GitHub Copilot to use Seqera AI as a subagent. Once installed, GitHub Copilot can invoke Seqera AI directly to manage workflows, build containers, query nf-core modules, and more without leaving your environment.
seqera skill install
Install to the standard Copilot instructions file:
seqera skill install --path .github/copilot-instructions.md
Or install to your home directory:
seqera skill install --global
You can also auto-detect and update an existing installation:
seqera skill install --detect
Usage
seqera skill install [OPTIONS]
Options
| Option | Short | Description |
|---|---|---|
--path <PATH> | -p | Install to a custom path (relative or absolute) |
--global | -g | Install to home directory |
--detect | -d | Auto-detect an existing installation and update it |
seqera skill check
Verify that your installed skill matches your current CLI version:
seqera skill check
Update automatically if needed:
seqera skill check --update
Usage
seqera skill check [OPTIONS]
Options
| Option | Short | Description |
|---|---|---|
--update | -u | Automatically update outdated skills |
--global | Check only global installations | |
--local | Check only local (repository) installations |
Learn more
- Use cases: Seqera AI CLI use cases
- Code intelligence: Language-aware coding support
- Installation: Detailed installation instructions